There are two main scripts to run simulations and analyze the measurement data.
1. To run simulation (both simulate data and analyze output): in matlab, run runSim
2. To run experiment (with measurment data provided): in matlab, run runExp
   the runExp. m script requires data in the directory "../DATA/". There should be two files for each measurement. The x.mat file contains the binray output of the probe outcomes (1 means the probe was received, 0 mean the probe was lost), and the Tx.mat file contains the probe sending time for each of the probes in the x.mat file.


In general, the runExp.m or runSim.m script will perform the following steps:

1. Check the trace for stationarity
2. Check the trace for renewal property
3. Call SAIL.m  to get the parameters of the gamma process and the variance.
4. Output the parameters and the 95% confidence interval.

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ACKNOWLEDGEMENT

SAIL uses two existing matlab scripts written by other people. These include:
1. The HSMM forward and backward algorithm implementation (the hsmm_new.m script) written by  Shun-Zheng Yu, available at: http://sist.sysu.edu.cn/~syu/Publications/hsmm_new_m.txt
2. The inverse laplace transform implementation (the invlap.m script) written by Karl Hollenbeck, Department of Hydrodynamics and Water Resources, Technical University of Denmark, DK-2800 Lyngby,email: karl@isv16.isva.dtu.dk, available at: http://www.isva.dtu.dk/staff/karl/invlap.htm